Snakemake
v5.3.0

Getting started

  • Installation
  • Examples
  • Snakemake Tutorial

Executing workflows

  • Executing Snakemake

Defining workflows

  • Writing Workflows
  • Rules
  • Configuration
  • Modularization
  • Remote files
  • Utils
  • Distribution and Reproducibility
  • Reports

API Reference

  • The Snakemake API
  • Additional utils

Project Info

  • Citing and Citations
  • More Resources
  • Frequently Asked Questions
  • Contributing
  • Credits
  • Change Log
  • License
Snakemake
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© Copyright 2014-2016, Johannes Koester. Revision a890ff62.

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